Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015794904.1_cds_XP_016441418.1_3597
CDS Infomation

[gene=LOC107767011] [db_xref=GeneID:107767011] [protein=vicilin-like antimicrobial peptides 2-3] [protein_id=XP_016441418.1] [location=join(10036..10519,10812..10987,11103..11186,11273..11539,11632..11947,12252..12418)] [gbkey=CDS]
Sequence

ATGGTAAAAGTGAGACCTTTTCTGTTTTGTGTGCTATTGCTTGCGGTTGCATCCTTAGCT
TTGGGTACAAAAGACCCAGAACTAAAACAATGCAAGCACCAGTGCAAAGCCCTACAGCAA
ATTGGGGAGCATCAAAGGAAAGAGTGCTATGAAATGTGCGAGAGATACCACAGTGAGAAA
CAATCGAAAGAAGAAGACACTTCAACTTTTTTGCCCTATAGAGGCAGAGAGGAAACAGGG
GAAGAAGAAGAACAGCAGTATGGGGAACAAGAGAGAGAAAATCCTTATGTCTTTGAGGAC
CAGCACTTTATTACTGGAATCAAAACCCAACATGGCAGAATTCGTGTTCTTCCCAAGTTC
ACAGAGAGGTCTAAGCTACTTAAGGGCATCGAGAATTACCGAGTTGCAATTCTTGAGGCC
AATCCACAGACCTTCATTGTGCCTAACCATTGGGACGCTGATGCTGTCCTCTTTGTTGCT
CAAGGGAGGGGAACACTGAACTTGGTACGTAGGGGGAAGAGGAACAGCTTCAATATTCGG
GCTGGAGATGTAATCAGAGTTCATGCTGGGACTACTGCTTACTTGATCAACAGGGACAAT
AATGAAAAACTTGTCATAGCCAAGCTTCTCAACCCGGTTTCCACCCCTGGCCAGTTTGAG
CACTTTTTTGGGCCAGGAGGGCGAGAAAACCCGGAGTCTTTTTACAACGCCTTCAGCTCT
GAAATTCTTGAATCTGCACTCAATGTTAGGAGGGATAGACTGCAGAGACTCTTCGGGCAG
CAGAGAGAAGGAGTTATTATAAGAGCTTCAGAAGAGCAAATCAGGGCAATGAGCCAGCAC
GAGGAAGGCGGAATTTGGCCTTTTGGTGGAGAATCAAAGGGTTCAGTCAACTTATATAGG
CAACGCCCCTTGCAATCCAACCAATATGGACAGCTTTATGAAGTAGACGGTAGCCACTAT
AGACAGCTAGAAGACCTTGATATTTCCGTCTCTTTGGCCAACATCACTCAGGGTGGGATG
TTCGGCCCAGCTTACAGCTCAAGGGCAACGAAAATAGCAGTAGTGGTTGATGGCGAAGGT
TACTTTGAGATGGCGTGCCCTCACTTGGCTTCTGAGTCTGGTAGCAGAGGACGACAAAGC
AGAGGAAGCGAAAGGGAAACGAGAATTGGTTCAGGGTATCAGAAGGTGCGGGCAAGGTTA
AGGCGTGGAATGGTGGTGATTATCCCTGCAGGCCATCCAGTTGTGAACGTAGCTTCAAAT
AACCAGAATTTGCAAGTTGTTTGCTTCAATATCAATGCCCGCAACAATGAAATTGTCCCT
CTTGCAGGGAGGAACAATGTAATGAGTCAACTGGAGAGGGAAGCAATGGAGTTGGGTTTT
GGGATACCGGCAAGAGAAGTGGAGGAAATATTCAGGAGCCAACAGGAGGAGTTCTTCTTC
CAGGGGCCTGGTGGTCGACAGCAACATCAGGAAGGTGGCCGAGCCGATGCATGA

Peptide Sequence

PEP ID

XP_016441418.1
PEP Infomation

PREDICTED: vicilin-like antimicrobial peptides 2-3 [Nicotiana tabacum]
Sequence

MVKVRPFLFCVLLLAVASLALGTKDPELKQCKHQCKALQQIGEHQRKECYEMCERYHSEK
QSKEEDTSTFLPYRGREETGEEEEQQYGEQERENPYVFEDQHFITGIKTQHGRIRVLPKF
TERSKLLKGIENYRVAILEANPQTFIVPNHWDADAVLFVAQGRGTLNLVRRGKRNSFNIR
AGDVIRVHAGTTAYLINRDNNEKLVIAKLLNPVSTPGQFEHFFGPGGRENPESFYNAFSS
EILESALNVRRDRLQRLFGQQREGVIIRASEEQIRAMSQHEEGGIWPFGGESKGSVNLYR
QRPLQSNQYGQLYEVDGSHYRQLEDLDISVSLANITQGGMFGPAYSSRATKIAVVVDGEG
YFEMACPHLASESGSRGRQSRGSERETRIGSGYQKVRARLRRGMVVIIPAGHPVVNVASN
NQNLQVVCFNINARNNEIVPLAGRNNVMSQLEREAMELGFGIPAREVEEIFRSQQEEFFF
QGPGGRQQHQEGGRADA

Transcript Sequence

Gene sequence data has not been registered.